PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G163200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 373aa    MW: 42173.1 Da    PI: 4.2584
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G163200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.61.7e-06190230853
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                         Er+RR+r+ + +  Lr ++P+      +K++K ++L  A  Y+++
  Aqcoe7G163200.1.p 190 SERNRRKRLSQQLLSLRAIVPNI-----TKMDKRSVLVDALSYLRN 230
                        6*********************7.....6**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.471182231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-11185247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-6188237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.51E-5189236No hitNo description
Gene3DG3DSA:4.10.280.102.5E-8189244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MGTQLDAFPF QEPRTQQDII SSWLDLDDAY TPIFQQELQD LENHLFQFET DPVSSSLPVP  60
EESPFMFDLY NFNAEQAGLE QNEAYQPILP VEQCVQQDVC DTFLNDYELG SMSSPTDLSP  120
DSNNNINDQF CDDTTISGFM NQLGDVEMSE PIVTPANTTD SNKTDDEDNE DGTDEDRPKP  180
GTLNCKNLVS ERNRRKRLSQ QLLSLRAIVP NITKMDKRSV LVDALSYLRN IHEETEKLQK  240
DLKAQQPRPK LSDLRESSQD NPSGTLRIPR TSVALPKPRA QITEIDTEKI EDKRFVVKIT  300
CKGGNGVGTD ILRVFESLDF EITYTALQQL QPQEVLVTIF VRVRKQGKMT EQKLKDCITS  360
MALRTGLSLQ NP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5FA010.0A0A2G5FA01_AQUCA; Uncharacterized protein
STRINGAquca_001_00352.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.41e-14bHLH family protein