PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G173600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family FAR1
Protein Properties Length: 127aa    MW: 13806.5 Da    PI: 8.4756
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G173600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.11.6e-095099149
               FAR1  1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkkte 49
                       ++Y+eY+++ GF +rk++s+k+    +e t+ +fvCs+egk+ +++++  
  Aqcoe7G173600.1.p 50 EYYEEYGRQNGFCMRKRSSNKTiIGVDELTSVKFVCSREGKHIKRTENGA 99
                       69******************99766778**************99998822 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.3E-750100IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MGVPNTSSSG LDGTDKIFEN GKTVDAHIYG EKLKAPYVGL SFDSIDEAKE YYEEYGRQNG  60
FCMRKRSSNK TIIGVDELTS VKFVCSREGK HIKRTENGAN NVPSRSCSTI NGNVKHACGF  120
CTIGKN*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026378309.16e-19protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A200QTB81e-16A0A200QTB8_9MAGN; FAR1 DNA binding domain
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.12e-08FAR1-related sequence 7