PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G179000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 166aa    MW: 18368.5 Da    PI: 4.8091
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G179000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544e-171968255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       +ykG+r +k +g+Wv+eIr+p+    +  r +lg++ t+e Aa a++ a  +l+g
  Aqcoe7G179000.1.p 19 KYKGIRCRK-WGKWVSEIRVPN----TqERLWLGSYNTPEAAAVAHDTALFCLRG 68
                       8*****777.**********93....25*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.1E-251878IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-181979IPR016177DNA-binding domain
SMARTSM003801.7E-261984IPR001471AP2/ERF domain
PfamPF008474.2E-91968IPR001471AP2/ERF domain
PROSITE profilePS5103220.8771978IPR001471AP2/ERF domain
CDDcd000181.67E-251978No hitNo description
PRINTSPR003671.0E-72031IPR001471AP2/ERF domain
PRINTSPR003671.0E-74258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MNQMEAGNAT SAGAGTSRKY KGIRCRKWGK WVSEIRVPNT QERLWLGSYN TPEAAAVAHD  60
TALFCLRGPS VVNQLNFPMY LPHYLPKNMS PKSIQKAATD AGSAVDVGSM QGTGERSMTS  120
VETHVQENDQ FWDNENDEYK FYAGTDSFIE CENLSISVED MEICL*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022719809.12e-47ethylene-responsive transcription factor ERF020-like
SwissprotQ9C9I81e-38ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A2G5FAG91e-120A0A2G5FAG9_AQUCA; Uncharacterized protein
STRINGAquca_001_00483.11e-121(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.14e-41ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]