PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G184100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 400aa    MW: 45410.6 Da    PI: 6.6708
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G184100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.61.7e-16132221198
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        f+k +++  v +  +l +p +f+++h   +  ++t++lede+g +++  +  ++k+    l++GW+ F+ a++L++gD +vF+l+  + ++l
  Aqcoe7G184100.1.p 132 FIKSMVRTQVYSCFWLGIPTEFCQNHL--PSDDVTIVLEDEDGLEYNSVYLADRKG----LSGGWRAFALAHKLDDGDALVFELT--EPRRL 215
                        899********************8884..34679****************767776....***********************85..56667 PP

                        EEEEE- CS
                 B3  93 vvkvfr 98 
                         + +f+
  Aqcoe7G184100.1.p 216 EIYIFK 221
                        887775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019365.49E-21127221IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.1E-18128221IPR015300DNA-binding pseudobarrel domain
CDDcd100177.82E-23130221No hitNo description
SMARTSM010197.9E-18132223IPR003340B3 DNA binding domain
PROSITE profilePS5086312.52132223IPR003340B3 DNA binding domain
PfamPF023621.0E-14132221IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MVRIRKNKLH NINNNNNNNN NVFEEIPKQE SLDEINKEEL PVEKPELKIG NTIDDLVEVR  60
RSSRARKLIC FDSEEIDTEF SRPLKRLKSS SWQRYSARPL NEIKFASDEE RAYAIQCAEN  120
FQRNLLSGYP CFIKSMVRTQ VYSCFWLGIP TEFCQNHLPS DDVTIVLEDE DGLEYNSVYL  180
ADRKGLSGGW RAFALAHKLD DGDALVFELT EPRRLEIYIF KAFELHTRKV VKNSDKKANS  240
DKTTSKNRET KDTKNSNKKA AKLNQDENSA VENDYPSTSS KAHTGGDGLK TAASRSNEGI  300
SVLEEALQSY EDSEGSVSSM VPREGLCKGE RDQTSCRITA TGGWKRTDFC CNEQTFESRE  360
DGKSCEGGGS SVSPLVQLSD DLWFGKKEIR TKFFRRKRT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5FB080.0A0A2G5FB08_AQUCA; Uncharacterized protein
STRINGAquca_001_00536.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-53B3 family protein