PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe7G186100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Trihelix

Protein Properties

Length: 324aa MW: 37836.7 Da PI: 4.6631

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G186100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.3	3.6e-12	85	171	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt+q + aL+++ ++ +l+r++l+ W ev++k+++ ++ r+ +qC+++++ +k+y k+k +++ + s+++yf++++ Aqcoe7G186100.1.p 85 EWTEQATSALLDVWGDRFLELGRKSLRSEEWIEVANKVSQlTKTVRTDVQCRNRMDVFKKKYIKEKIKLEENGGSNISKWVYFKKMD 171 5***********************************76156789************9999998888788889******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	1.5E-18	84	173	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
MNEGDSKKHL KRYSVNPRDH NYINSSQQRM KKLPSSSSSS PYAQQVSNEY SDDEEEEESR 60 ERYQRKRKWS NEEYEFAPRF SNSEEWTEQA TSALLDVWGD RFLELGRKSL RSEEWIEVAN 120 KVSQLTKTVR TDVQCRNRMD VFKKKYIKEK IKLEENGGSN ISKWVYFKKM DMLMSSSLRQ 180 CGLACGLDSG EYVFMDTNVY LNCANELDEM RDSPQSSESS EGITPKEVRG RENGDEGNSF 240 RLLADSIQKF GEIYEKIEES KRKQMRELEK MRLEFHRDLE LQKRQILEHA QAEIAKIQQE 300 EDDDDDDDNG EDEINASVGN LSE*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010249791.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249792.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249793.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249794.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249795.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249796.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249797.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249798.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249799.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249800.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249801.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_019052392.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_019052393.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_019052394.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_019052395.1	1e-101	PREDICTED: trihelix transcription factor ASIL2-like
TrEMBL	A0A2G5FAZ0	0.0	A0A2G5FAZ0_AQUCA; Uncharacterized protein
STRING	Aquca_001_00551.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-64	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Aqcoe7G186100.1.p