PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G247700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family FAR1
Protein Properties Length: 364aa    MW: 42510.4 Da    PI: 6.7808
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G247700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.71.4e-1656143191
               FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                        ++Yne A++v Fs+++++++k  ++ ++++ +t++Cs+eg+ ++ ++     rr+r+e r gC ak+++k++kd+k+e+tk+  eH+Hel+p
  Aqcoe7G247700.1.p  56 NYYNEIARTVEFSIKIKRTNKYhRDFDKVVLQTLCCSCEGTYTKVHTP----RRRREERRFGCMAKFEIKLNKDEKFELTKFLAEHSHELVP 143
                        69*************9988877477789**************998777....999***********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.0E-1256143IPR004330FAR1 DNA binding domain
PfamPF105518.0E-10280323IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MDQNDFQNNG NPIDRHGHQA DIEETTFDIQ DERVDVLDKL IPNLGLLFDN VKDAYNYYNE  60
IARTVEFSIK IKRTNKYHRD FDKVVLQTLC CSCEGTYTKV HTPRRRREER RFGCMAKFEI  120
KLNKDEKFEL TKFLAEHSHE LVPPTCSYLL RSHRGVKKSQ AGIMKKMHSS GLQPSDIYYY  180
FCAEAGGAEH VNLSQSHCNN LLQRERVEIL KMGDAVCLLE YFKQKKQENK YFYYDILTNE  240
ESEIRGIFFC DALSRRDYAL FGDVICFDTT FHTNNYNLSF VQVMGGKKPG TIFTDQSIAI  300
LKDIAAVFPD AHHTLCIWHI FQNGAKHLAK VFAEFKDFSK QFKECIYEPE TIEEFEEIWK  360
KLL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024195552.11e-120protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2P6SL241e-117A0A2P6SL24_ROSCH; Putative transcription factor FAR family
STRINGEMJ255101e-114(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-40FAR1-related sequence 5