PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G252700.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 192aa    MW: 22196.1 Da    PI: 5.9857
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G252700.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.12.6e-1441109270
           trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                        W+ +e l L++ ++++e+++ ++ +  ++W  vs+++ + g+ rs +qC+  w+ l  +y++ik++e++
  Aqcoe7G252700.3.p  41 WSLHEMLILVNQVSSIESDFMKSMSSYQKWNLVSSNCNSLGVVRSLNQCRRQWDLLLDEYQRIKDWESQ 109
                        *******************************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.2E-1040112No hitNo description
PROSITE profilePS500906.1914097IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MDLQTLLTPI KRKRISSDSK PTTNKRSNRN RNSRSQIFPN WSLHEMLILV NQVSSIESDF  60
MKSMSSYQKW NLVSSNCNSL GVVRSLNQCR RQWDLLLDEY QRIKDWESQS GISYWFLDND  120
SKLELGLPKS FEKQLFLFVD DNVKAQEEQL LADSGNSDPD FNVAKDTAWR PICSYVLFAE  180
LVEVILLYVS A*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5D0I71e-117A0A2G5D0I7_AQUCA; Uncharacterized protein
STRINGAquca_031_00042.11e-118(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.19e-34sequence-specific DNA binding transcription factors