PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G285400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 164aa    MW: 18750.9 Da    PI: 7.5969
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G285400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.52.9e-12753154
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                       s+y GV  ++ ++++++eIr        kr +lg+f t+e+Aa+a+++a+   +
  Aqcoe7G285400.1.p  7 SKYIGVQ-RR-NQKYASEIRIL-----GKRRWLGTFSTEEQAARAYDNAAYGAR 53
                       79****5.44.79********3.....4*********************97665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.843162IPR001471AP2/ERF domain
CDDcd000183.36E-20764No hitNo description
SuperFamilySSF541711.31E-15764IPR016177DNA-binding domain
PfamPF008472.0E-5750IPR001471AP2/ERF domain
SMARTSM003802.1E-18868IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-19862IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MGITKKSKYI GVQRRNQKYA SEIRILGKRR WLGTFSTEEQ AARAYDNAAY GARGFKAKLN  60
FPYNNIFSQN LDTSLQVFLS ASTISNEDAE ENPLVRDDQQ DKKCNDFDGW LELLGVVPQS  120
YRNHEGIWMK VAFSESHKTM GGDSDKIFDV FDFRSNFSNM EHI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-127631373Ethylene-responsive transcription factor ERF096
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DK871e-75A0A2G5DK87_AQUCA; Uncharacterized protein
STRINGAquca_018_00164.12e-76(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.13e-07ERF domain protein 10