PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe7G288200.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bZIP

Protein Properties

Length: 430aa MW: 47631.2 Da PI: 8.0938

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G288200.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.2	2.3e-15	239	286	4	51
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +k+ rr+ +NRe+ArrsR+RK+a + Le+ v++L eN +L k+ + Aqcoe7G288200.2.p 239 VKKIRRMVSNRESARRSRRRKQAHLVDLETQVDQLRVENGSLYKQFAN 286 799**************************************9987655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.2E-14	236	300	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.381	238	290	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.7E-14	239	286	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.62E-12	239	290	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.0E-11	240	290	No hit	No description
PROSITE pattern	PS00036	0	243	258	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	7.3E-8	307	412	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0071333	Biological Process	cellular response to glucose stimulus
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0042803	Molecular Function	protein homodimerization activity
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence Send to blast
MYKAHKAILG WLFPYVISFE LLFICLFLSP SIFISLSHTI TTSTTKRQRM DPKHIEEIID 60 RTSNNNTSVF GRNMKRSASQ LDDLEKFLRC MTTIESKVGD GEIRVHQKAR IGGETQGGRF 120 FNVQQGHHDQ KRFQDVRASD LSFSFGNQEK VRAFPSCEVG LTESLVWSQN PVLKHSSISA 180 TIDSQSSMCA GSPTSAHKPK SGDNQARGTT SGSSREQSDD DDVEIDGGSC GQSMDPLAVK 240 KIRRMVSNRE SARRSRRRKQ AHLVDLETQV DQLRVENGSL YKQFANANRQ FGEAGTDNRV 300 LKSDVEALRL KVKLAEDMVA RGSLTCSLNH LLQSYSSSSQ PLNSHDLFQV SDVSPTLGVR 360 GEQASYISVS DSGQISALGL EDVDTGNDSI KNRLNQNTPV IQRNASLDHL QSLQNRISEA 420 VSCLSETWQ*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence Send to blast

MYKAHKAILG WLFPYVISFE LLFICLFLSP SIFISLSHTI TTSTTKRQRM DPKHIEEIID  60
RTSNNNTSVF GRNMKRSASQ LDDLEKFLRC MTTIESKVGD GEIRVHQKAR IGGETQGGRF  120
FNVQQGHHDQ KRFQDVRASD LSFSFGNQEK VRAFPSCEVG LTESLVWSQN PVLKHSSISA  180
TIDSQSSMCA GSPTSAHKPK SGDNQARGTT SGSSREQSDD DDVEIDGGSC GQSMDPLAVK  240
KIRRMVSNRE SARRSRRRKQ AHLVDLETQV DQLRVENGSL YKQFANANRQ FGEAGTDNRV  300
LKSDVEALRL KVKLAEDMVA RGSLTCSLNH LLQSYSSSSQ PLNSHDLFQV SDVSPTLGVR  360
GEQASYISVS DSGQISALGL EDVDTGNDSI KNRLNQNTPV IQRNASLDHL QSLQNRISEA  420
VSCLSETWQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	252	259	RRSRRRKQ
2	254	259	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269\|PubMed:11133985}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010259867.1	1e-135	PREDICTED: basic leucine zipper 9-like isoform X2
Swissprot	Q6H500	2e-62	RSBZ4_ORYSJ; bZIP transcription factor RISBZ4
TrEMBL	A0A2G5DK86	0.0	A0A2G5DK86_AQUCA; Uncharacterized protein
STRING	Aquca_018_00141.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	7e-43	basic leucine zipper 9

Link Out ? help Back to Top
Phytozome	Aqcoe7G288200.2.p

Publications ? help Back to Top
Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif. J. Biol. Chem., 2001. 276(17): p. 14139-52 [PMID:11133985] Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]