PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G325300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 172aa    MW: 19633.3 Da    PI: 7.406
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G325300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.00054870123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       ++C++C + F ++  L  H++ H
  Aqcoe7G325300.1.p 48 FSCNYCQRKFHSSQALGGHQNAH 70
                       89*****************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.28E-64575No hitNo description
PROSITE profilePS5015711.1364875IPR007087Zinc finger, C2H2
PROSITE patternPS0002805070IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MDFHPYSSLD LNIPNQELNL ELVLEPSSSS SSSPPSSLGP SQHEPRIFSC NYCQRKFHSS  60
QALGGHQNAH KLERTLAKRN RDLSSSIRQH GGSNHRSRSD TDDSNHIGQV QSSNIYQRHV  120
ARFENETNYG TRREMNYGLV LERENSWGHN YRSENVNKED FNQHIDLSLK L*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010259825.17e-49PREDICTED: zinc finger protein 2
TrEMBLA0A2G5CBJ41e-122A0A2G5CBJ4_AQUCA; Uncharacterized protein
STRINGAquca_068_00070.11e-123(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.11e-26zinc finger protein 2