PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G341000.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family G2-like
Protein Properties Length: 297aa    MW: 32488.1 Da    PI: 7.0897
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G341000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.12e-331973155
            G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                       ++rlrWt++LHerFv+av+qLGG+++AtPk +l++m+v+gLt++h+kSHLQkYRl
  Aqcoe7G341000.2.p 19 RQRLRWTNDLHERFVDAVAQLGGPDRATPKGVLRMMGVQGLTIYHIKSHLQKYRL 73
                       58****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.9991676IPR017930Myb domain
SuperFamilySSF466892.15E-171873IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.6E-321874IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-252074IPR006447Myb domain, plants
PfamPF002498.1E-102172IPR001005SANT/Myb domain
PfamPF143795.1E-23104150IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MESNSGPNTL SKNPSLNSRQ RLRWTNDLHE RFVDAVAQLG GPDRATPKGV LRMMGVQGLT  60
IYHIKSHLQK YRLAKYLPDA ASDGKGEDKK ESGDLSSMDN SSGMQITEAL KLQMEVQKRL  120
HEQLEVQRQL QLRIEAQGNY LKKILEEQQR LSGTLAEPHG LNSPAPANNN SPALDNKSDP  180
STPAPTSETP LDKGSKDSAP AKFPALDDTF ASFHEPLTPD SSCQGGFSVE SPKGGRSAKK  240
QKRNMSTSHA QPQMAFQHQI LESSLSTGFQ QQAASALPIK EHFDHSGDSY SDDDRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A6e-231976158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-231976158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-231976158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-231976158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021666822.11e-131myb family transcription factor PHL7-like isoform X1
RefseqXP_021666823.11e-132myb family transcription factor PHL7-like isoform X2
SwissprotQ9SJW01e-111PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2G5DRC40.0A0A2G5DRC4_AQUCA; Uncharacterized protein
STRINGAquca_016_00381.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-96G2-like family protein