PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe7G342900.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

NAC

Protein Properties

Length: 328aa MW: 38089.3 Da PI: 8.911

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G342900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91.4	1.6e-28	10	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk........sgy 82 l+pGfrF+Ptdeel+v+yL+++v +k+++ + vi+++d++ + P++L+ k ++ ++ +++fF++r+++y++g r++r+t+ + + Aqcoe7G342900.1.p 10 LAPGFRFRPTDEELIVYYLRPRVFNKPIPYNVVIADADVFGIPPEKLKdKaAFVPGDGNLFFFAERKRRYPKGGRPQRSTRctenmkadHLT 101 579*************************888**********8433344478899***********99985545455444778 PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 W +t ++ +++ k+g+++g++ L + +++ t+W mhe+++ Aqcoe7G342900.1.p 102 WTSTQTQVQIKLKNGKVIGTRALLKLMVNKK----PTKWRMHEFKI 143 **********************94444....579****87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.12E-32	4	171	IPR003441	NAC domain
PROSITE profile	PS51005	32.92	10	171	IPR003441	NAC domain
Pfam	PF02365	6.0E-16	12	143	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MEFNVNKLRL APGFRFRPTD EELIVYYLRP RVFNKPIPYN VVIADADVFG IPPEKLKDKA 60 AFVPGDGNLF FFAERKRRYP KGGRPQRSTR CTENMKADHL TWTSTQTQVQ IKLKNGKVIG 120 TRALLKLMVN KKPTKWRMHE FKIEKSCLPP PKDDQGKEGY LDVVLCRVYK KKEGKFDNKN 180 KDETEEVAHN PITSTSTMPL EEQPSGYYLP SNTGGSQIPY QHQPAQYHPD QYQHQYDQPQ 240 YQHQPLPQPH QLQCQLPPQL YCQPQSQLQC QAQLQHQTLP PSQPEPLPPF QPYQQPQPIY 300 ENNLESFSEI CKSQQDREVE NWKGIFP*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	7e-20	5	173	12	167	NO APICAL MERISTEM PROTEIN
1ut4_B	7e-20	5	173	12	167	NO APICAL MERISTEM PROTEIN
1ut7_A	7e-20	5	173	12	167	NO APICAL MERISTEM PROTEIN
1ut7_B	7e-20	5	173	12	167	NO APICAL MERISTEM PROTEIN
3swm_A	8e-20	5	173	15	170	NAC domain-containing protein 19
3swm_B	8e-20	5	173	15	170	NAC domain-containing protein 19
3swm_C	8e-20	5	173	15	170	NAC domain-containing protein 19
3swm_D	8e-20	5	173	15	170	NAC domain-containing protein 19
3swp_A	8e-20	5	173	15	170	NAC domain-containing protein 19
3swp_B	8e-20	5	173	15	170	NAC domain-containing protein 19
3swp_C	8e-20	5	173	15	170	NAC domain-containing protein 19
3swp_D	8e-20	5	173	15	170	NAC domain-containing protein 19
4dul_A	7e-20	5	173	12	167	NAC domain-containing protein 19
4dul_B	7e-20	5	173	12	167	NAC domain-containing protein 19

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5DR90	0.0	A0A2G5DR90_AQUCA; Uncharacterized protein
STRING	Aquca_016_00364.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	2e-26	NAC domain containing protein 47

Link Out ? help Back to Top
Phytozome	Aqcoe7G342900.1.p