PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G377900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 574aa    MW: 64023.6 Da    PI: 4.5974
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G377900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.53.2e-5091391128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        lp+G+rF+Ptdeelv++yLk k++g++ ++ e+i+evd++k+ePwdLp  + +k+e+ ew+fF++rd+ky++g+r+nr t++g+Wkatgkd+
  Aqcoe7G377900.1.p   9 LPVGYRFSPTDEELVNYYLKLKIQGQNSKV-EAIPEVDVCKWEPWDLPslSVIKNEDPEWFFFCPRDQKYPKGRRSNRRTDKGFWKATGKDR 99 
                        799************************999.89***************5447788888********************************** PP

                NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +++++  + +++g+kktLvf+ g+ap g++t W+mheyr+
  Aqcoe7G377900.1.p 100 TIKARtsGMKKIGMKKTLVFHLGNAPGGQRTGWIMHEYRM 139
                        ***99777889***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.41E-564154IPR003441NAC domain
PROSITE profilePS5100554.5079154IPR003441NAC domain
PfamPF023651.8E-2710139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
MAVLPLNYLP VGYRFSPTDE ELVNYYLKLK IQGQNSKVEA IPEVDVCKWE PWDLPSLSVI  60
KNEDPEWFFF CPRDQKYPKG RRSNRRTDKG FWKATGKDRT IKARTSGMKK IGMKKTLVFH  120
LGNAPGGQRT GWIMHEYRME SEEGPFVLCR LFNKEKAESN CDEVEPTGFS PTAANSSPES  180
MQQGKAPLPA NSESDVQVGE NPTDTKRWLE DKSDKITPNN SFPERSYSNS CQASDVDDHG  240
AELAIEEDAQ QGDYMGILDD PRFESLDQAL SPLDNKTSTG LQPYYTGSAF TREFDNTLNE  300
MVPEDGSKQP DIFDLDLDLL KKCLDNFENI YALQPGESVV SGSASDTDNE VLQAQAYQRE  360
GLPGFSRPVD ANDSLEMQKD IEFNGNEGLY WDDFFNESMG LFLDDPPPGL SVESPTGVKI  420
KTPHPQYQSS SQNFVSQGTA ARRVRLQKKL IRRVASFKGK ESSCPTKDLE VKPTVSKTTG  480
EAEIGTITVP PPLASVLASE VGDEISDELR TKLRLRTRSR CDVIDSDQQD STLNVKEAPS  540
LSPFSYLRLH MVSVAVIVIF AVFFVGAWQC LAT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-39915515169Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DFK80.0A0A2G5DFK8_AQUCA; Uncharacterized protein
STRINGAquca_020_00034.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.19e-75NAC 014