PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G378100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 580aa    MW: 64279.9 Da    PI: 4.5901
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G378100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.71.8e-5291391128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        lp+G+rF+Ptdeelv++yLk k++g++ ++ e+i+evd++k+ePwdLp  + +k+e+ ew+fF++rd+ky++g+r+nrat++gyWkatgkd+
  Aqcoe7G378100.1.p   9 LPVGYRFSPTDEELVNYYLKLKIQGQNSKV-EAIPEVDVCKWEPWDLPslSVIKNEDPEWFFFCPRDQKYPKGRRSNRATDKGYWKATGKDR 99 
                        799************************999.89***************5447788888********************************** PP

                NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +++++  + +++g+kktLvf++grap+g++t W+mheyr+
  Aqcoe7G378100.1.p 100 TIKARtsGMKKIGMKKTLVFHRGRAPEGQRTGWIMHEYRM 139
                        ***99777889***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-574154IPR003441NAC domain
PROSITE profilePS5100556.4529154IPR003441NAC domain
PfamPF023655.7E-2810139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MAVLPLNYLP VGYRFSPTDE ELVNYYLKLK IQGQNSKVEA IPEVDVCKWE PWDLPSLSVI  60
KNEDPEWFFF CPRDQKYPKG RRSNRATDKG YWKATGKDRT IKARTSGMKK IGMKKTLVFH  120
RGRAPEGQRT GWIMHEYRME SEEGPFVLCR LFNKEKAESN CDEVEPTGFS PTAANSSPES  180
MQQGKAPLPA NSESDVQVGE NPTDTKRWLE DKSDNITPNN SFPERSYSNS CQASNVDDHG  240
AELAIEEDAQ QGDYMGILDD PSFESLDQTL SPLDNKTSTG LQPYYTGSAF TREFGNTLNE  300
MVAEDGSKLP DIFDLDLDLD LLEKYLDNSK NIYALQPGES VVSGSASDTD NVVLQAQAYQ  360
GEGLPWFSGP VDANDSLGMQ KKIEFNGNEG FYGDDFFNEN MGLFIDDPPG LSVESPKHYR  420
IGSQTRVTTV DDTKNSLAIG VCQGSAARGV RLQKKLIRRV ASFKGKESSC PTKDLEVKPT  480
VSKTTGEAEI GTITVPPPLA SVLASEVGDE ISDELRTKLR LRTRSRCDVI DSDQQDSTLN  540
VKEAPSLSPF SYLRLHMVSV AVIVIFAVFF VGAWQCLAT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-42915515169Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DFK10.0A0A2G5DFK1_AQUCA; Uncharacterized protein
STRINGAquca_020_00035.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.15e-80NAC 014