PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe7G395000.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Trihelix

Protein Properties

Length: 420aa MW: 48171.9 Da PI: 4.2325

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G395000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.9	1.4e-14	184	268	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++ + L++a ++ +l+r++l+ W ev+kk+++ r+ +qC+++++ l+k+ykk+k + + t e+ss+++y+++++ Aqcoe7G395000.1.p 184 WTENATFILLDAWGDRFLQLGRKSLRSDEWHEVAKKVSQLSKsVRTDTQCRNRLDTLKKKYKKEKMMLAD-TGETSSKWVYYKKMD 268 ***********************************87665278********************9.688999******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	3.0E-20	183	270	No hit	No description
Gene3D	G3DSA:1.10.10.60	2.9E-4	207	248	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence Send to blast
MDDTEDDARY PPNPYSSNYH QNHVSSHRPK LPVRNAPYNE AIGNEYGEEE DDDDDEEEEE 60 EEIREEEVGE EAEEEGDEED MEEEENGGQQ VVEEPDEDED DDDEEEEEKG EGAEDEFRDE 120 DEDGGNFYQR REIDEDSERH AKKRKLKNLA FGYEFAPRVA TPSAATTSAP KPSFGGGRHS 180 PADWTENATF ILLDAWGDRF LQLGRKSLRS DEWHEVAKKV SQLSKSVRTD TQCRNRLDTL 240 KKKYKKEKMM LADTGETSSK WVYYKKMDML MTSASSRQPG LSCGLDSGEY VFMNPKSYLN 300 RSNGLDEMRD SPGNSESSEG NGEESDGLPP KRTRSVETNH GRSSFRLLAD SIQKFGEIYE 360 KIENSKRQQM VELEKMRMDF HRDLEMQKRQ IMERAHAEIA KIRQGDDEEI DVSTENTSG*

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence Send to blast

MDDTEDDARY PPNPYSSNYH QNHVSSHRPK LPVRNAPYNE AIGNEYGEEE DDDDDEEEEE  60
EEIREEEVGE EAEEEGDEED MEEEENGGQQ VVEEPDEDED DDDEEEEEKG EGAEDEFRDE  120
DEDGGNFYQR REIDEDSERH AKKRKLKNLA FGYEFAPRVA TPSAATTSAP KPSFGGGRHS  180
PADWTENATF ILLDAWGDRF LQLGRKSLRS DEWHEVAKKV SQLSKSVRTD TQCRNRLDTL  240
KKKYKKEKMM LADTGETSSK WVYYKKMDML MTSASSRQPG LSCGLDSGEY VFMNPKSYLN  300
RSNGLDEMRD SPGNSESSEG NGEESDGLPP KRTRSVETNH GRSSFRLLAD SIQKFGEIYE  360
KIENSKRQQM VELEKMRMDF HRDLEMQKRQ IMERAHAEIA KIRQGDDEEI DVSTENTSG*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010249791.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249792.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249793.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249794.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249795.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249796.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249797.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249798.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249799.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249800.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_010249801.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_019052392.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_019052393.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_019052394.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
Refseq	XP_019052395.1	1e-165	PREDICTED: trihelix transcription factor ASIL2-like
TrEMBL	A0A2G5DH40	0.0	A0A2G5DH40_AQUCA; Uncharacterized protein
STRING	Aquca_020_00179.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	3e-69	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Aqcoe7G395000.1.p