PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G398900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 285aa    MW: 31908.8 Da    PI: 4.3199
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G398900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.35e-07151195755
                        HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        ++ r+RR++i ++ +eL +l+P +    s+ +s a++ + A +Y+++Lq
  Aqcoe7G398900.1.p 151 IAARQRRRKISEKTQELGKLIPGS----SRMNSTAAMFQAAYKYVQYLQ 195
                        567********************9....788*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.541144194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-10147207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.5E-10149209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-6150200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.32E-6151198No hitNo description
PfamPF000101.2E-4152195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MFDMGSSMLY GQPELGEELL MEKFYDDFVQ SLFEPNDADS NNTSTSSSTS FLPLPYLDYC  60
FPTERPFVSL PAPDELVDQC YLADCCYQNP KRQKTNSYLD LHYPMNTFPQ YPEFFNFPQT  120
EPIQLPPMVY ESSTVKKKSS SSSSGLSPQS IAARQRRRKI SEKTQELGKL IPGSSRMNST  180
AAMFQAAYKY VQYLQAQVGI LQLMHQQGSN NQENVPLIEE GLEVLLASPS IQEKLYSEEK  240
CLVPQDFVVE TLAKDNEIIQ SNPSISKDIA LLAQPSSSSS TSSE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DGG30.0A0A2G5DGG3_AQUCA; Uncharacterized protein
STRINGAquca_020_00213.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.13e-25bHLH family protein