PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G419500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 188aa    MW: 21002.6 Da    PI: 4.4041
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G419500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82.1e-162270355
                AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                       +kGVr +  +g Wv+eIr p     +   r++lg+f+ +e+Aa+a++aa  +l+g
  Aqcoe7G419500.1.p 22 FKGVRMRT-WGTWVSEIRIP-----HskERIWLGSFDAPEKAARAYDAALYCLRG 70
                       8****998.**********6.....336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.5E-282184IPR001471AP2/ERF domain
PROSITE profilePS5103220.1122178IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-272179IPR001471AP2/ERF domain
PfamPF008478.6E-92270IPR001471AP2/ERF domain
CDDcd000185.23E-272280No hitNo description
SuperFamilySSF541711.9E-182279IPR016177DNA-binding domain
PRINTSPR003671.1E-72233IPR001471AP2/ERF domain
PRINTSPR003671.1E-74460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MGSPSKKPRT GDLKLGKEDA SFKGVRMRTW GTWVSEIRIP HSKERIWLGS FDAPEKAARA  60
YDAALYCLRG SEGKFNFPDD ERPQIPDNSI EPLSTTEIKA IASRFASSEC MSVLSSTSVF  120
PTIKPPEVVD RGVEVESKFD VDSLFVADFP DHDTFFSESF ILDELITFEP DSIWAVLEET  180
ENLLTEK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-151080374Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026458490.12e-48ethylene-responsive transcription factor ERF015-like
TrEMBLA0A2G5F1Y23e-79A0A2G5F1Y2_AQUCA; Uncharacterized protein
STRINGAquca_002_00165.14e-80(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.15e-43ERF family protein