PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G424700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 528aa    MW: 59201.1 Da    PI: 6.0321
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G424700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-12346392455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         h+  Er+RR+++N++f eLr+llP+       K +Ka++L  + +Y+++Lq
  Aqcoe7G424700.1.p 346 HHKLSERKRREKLNESFLELRSLLPPG-----SKKDKASVLSNTLQYLSNLQ 392
                        5999*********************95.....599****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.758342391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-15342409IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.90E-13342395No hitNo description
Gene3DG3DSA:4.10.280.104.7E-15346410IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.8E-10346392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.9E-14348397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MDAVFFLDIE ARMIFIRSLA QTLGCSYICL WSYVNVPGHL NDCLLSIDGW YNDDNNQPSC  60
STRSFTYRLF NAYRQTQHNI NSGFVPGLAF KENIPYLELN DVDLLQRISN VSQRQFYQGA  120
RIKSAAFLSC RSGEIEIGMS TTLPVNLKME IINWFQQSQL QELIIPPQAQ ADQNWPSSSS  180
SSLLSLGSPD SSSLLFNVPI SSTSYVPEFL KEPQFEEAIR PTSTPVLPLQ LQTMEAYNRL  240
RIKNLNPESD NAAIARAMLA VISSPSSSSS SHQPPQTTAY GSHVSHKTGG AFRDYTPALS  300
HNIPLIANPG KQNMLKRSIS MMRKIDLSWR QQEPEQGIPP TSSQLHHKLS ERKRREKLNE  360
SFLELRSLLP PGSKKDKASV LSNTLQYLSN LQTEVLELKQ KNQLLEGRTT SHARGPGEEL  420
DQTGSSNEKI DVQIIQTSES TSEEHEIDLQ VIVKGDCNMV DLIINILGFL KLVNEVSLVW  480
MNADTELLQT TSINQVILRL KIKVSDEWDE PTFKEAVTRI VADVVTK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1350355ERKRRE
2351356RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010262090.11e-146PREDICTED: putative transcription factor bHLH041
TrEMBLA0A2G5DHP20.0A0A2G5DHP2_AQUCA; Uncharacterized protein
STRINGAquca_020_00438.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-42bHLH family protein