PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G424700.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 390aa    MW: 43427.3 Da    PI: 6.121
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G424700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.6e-13208254455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         h+  Er+RR+++N++f eLr+llP+       K +Ka++L  + +Y+++Lq
  Aqcoe7G424700.2.p 208 HHKLSERKRREKLNESFLELRSLLPPG-----SKKDKASVLSNTLQYLSNLQ 254
                        5999*********************95.....599****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.39E-13202257No hitNo description
PROSITE profilePS5088815.758204253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.11E-16204271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-10208254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-15208272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.9E-14210259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MSTTLPVNLK MEIINWFQQS QLQELIIPPQ AQADQNWPSS SSSSLLSLGS PDSSSLLFNV  60
PISSTSYVPE FLKEPQFEEA IRPTSTPVLP LQLQTMEAYN RLRIKNLNPE SDNAAIARAM  120
LAVISSPSSS SSSHQPPQTT AYGSHVSHKT GGAFRDYTPA LSHNIPLIAN PGKQNMLKRS  180
ISMMRKIDLS WRQQEPEQGI PPTSSQLHHK LSERKRREKL NESFLELRSL LPPGSKKDKA  240
SVLSNTLQYL SNLQTEVLEL KQKNQLLEGR TTSHARGPGE ELDQTGSSNE KIDVQIIQTS  300
ESTSEEHEID LQVIVKGDCN MVDLIINILG FLKLVNEVSL VWMNADTELL QTTSINQVIL  360
RLKIKVSDEW DEPTFKEAVT RIVADVVTK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212217ERKRRE
2213218RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DHP20.0A0A2G5DHP2_AQUCA; Uncharacterized protein
STRINGAquca_020_00438.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-43bHLH family protein