PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G436800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 360aa    MW: 40038 Da    PI: 10.3924
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G436800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix445.6e-1474161186
           trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                        +W++  + +Li+a  e+  +l+rg+lk+++W++v++ + +++ +++   + +qCk++++ l+k+yk + +   ++  +  s++ +f++l+
  Aqcoe7G436800.1.p  74 CWSEGATSTLIDAWGERYLELSRGNLKQKHWRDVADIVsSREDYNKpakTDVQCKNRIDTLKKKYKIEVAKIASG--QGPSKWNFFHRLD 161
                        7*************************************86666765333788******************99998..56668******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.6E-2572163No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0010431Biological Processseed maturation
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MEDEEEIQQT KALAAIPNQN GGRFLMTAQP VTVATPPPPQ NILTLALPIQ QPRTTHGGSG  60
SGSGGGGGGG REDCWSEGAT STLIDAWGER YLELSRGNLK QKHWRDVADI VSSREDYNKP  120
AKTDVQCKNR IDTLKKKYKI EVAKIASGQG PSKWNFFHRL DRLIGPNAKN PASAVRVNAG  180
MPMTPMTNAK IPVGIPVGVP LRKSQQQQYG QQRRKQQYQR PGSIDSNSSS EPPPSPDSTD  240
SLPPENTNRK KPRFERKLNS DPLKTDSGNL RKNAGWGNSM KELSRAILEF GEAYERIETS  300
KLQQTVEMEK QRIGFAKELE LQRMQFLMNT QLELTQLKHG KKLDSSNHHH NNNNRNRSN*
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00356DAPTransfer from AT3G14180Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010654396.11e-115PREDICTED: trihelix transcription factor ASIL2
SwissprotQ9LJG86e-93ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2G5DI600.0A0A2G5DI60_AQUCA; Uncharacterized protein
STRINGAquca_020_00550.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.12e-52sequence-specific DNA binding transcription factors