PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G440400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 546aa    MW: 59157.8 Da    PI: 4.8551
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G440400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.41.9e-11326371555
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        h+++Er RR++i +++ +L+el+P++      K +Ka++L + +eY++ Lq
  Aqcoe7G440400.1.p 326 HSIAERLRREKIAERMKNLQELVPNS-----NKTDKASMLDEIIEYVRFLQ 371
                        99***********************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.31E-16319381IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.61E-12319375No hitNo description
PROSITE profilePS5088817.072321370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-16323380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.8E-9326371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-13327376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    Send to blast
MDEFVDHFFS SSSWPDVDGS ERSSWVGSEF DQTNGLLPDT MVAYEGGDNN LPATIIPSHP  60
ITDTLLAQGT SMFAGGDPSF EHDKNLLSGE AQEQLLQGGI DRGSKTSLLG LMDGNLNPGY  120
MDQQLNTPVT LGTLSYSSPE LLPAAIDLAK SPTSVQPESG SVGSNDSEPS EIQTTLRDPH  180
SLTPIPHLWP MSSYRAVSSL PSIMVPDQLQ GLGLQGQYVE TDAAVLGNNN FKDDNFLQGN  240
LQALLNEQHE LNNHYLSSFA ARHQTPLELT AEHPQMQLTE GDSIKHYTDQ SPISQLPHAP  300
STAVGSCNGA VKPRVRARRG QATDPHSIAE RLRREKIAER MKNLQELVPN SNKTDKASML  360
DEIIEYVRFL QLQVKVLSMS RLGATGAVVP LITENQPEGS TSHFLSQSAG RDVKHIESPN  420
TLTFEQEVVK LMESNMTKAM QFLQRKGLCL MPIALAAAIS SSKAPPASLS TEGKKSILTN  480
GFVHHNSGQP NIGPGQISSD GETRSEENII GIHSREDFSS NSCSGTSIKK EGTNTTNFTR  540
EMNQE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261699.11e-177PREDICTED: transcription factor bHLH68-like isoform X1
RefseqXP_010261700.11e-177PREDICTED: transcription factor bHLH68-like isoform X1
RefseqXP_010261701.11e-177PREDICTED: transcription factor bHLH68-like isoform X1
RefseqXP_010261702.11e-177PREDICTED: transcription factor bHLH68-like isoform X1
RefseqXP_010261703.11e-177PREDICTED: transcription factor bHLH68-like isoform X1
TrEMBLA0A2G5DI860.0A0A2G5DI86_AQUCA; Uncharacterized protein
STRINGAquca_020_00579.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58010.11e-53LJRHL1-like 3