PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.023N4
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 517aa    MW: 58502.4 Da    PI: 9.6168
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.023N4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.6e-12331375554
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h ++ErrRR+++N+ f+ Lr llP+      +K +Ka+iL+ A e ++sL
  Aradu.023N4 331 HMIAERRRREKLNDNFQALRALLPPG-----TKKDKASILTTAKETLSSL 375
                  889*********************97.....8***********9999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.69E-10324380No hitNo description
SuperFamilySSF474591.06E-14326396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.246326375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-14330393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-9331375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-10332381IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MMEGVFFLPE VARTGYLRSI VQSVGCAYIC LWSFDPTSSP NNRLFFLDGF YNNVRNNQQA  60
SSSLGSVAQQ LFNQFRTLRF DANDDRIPGL AFRNNRPYVE VQQPELLRLA WTQIQKQFFQ  120
EARIKTAVFM GCNKGEIELG FLNLSQAEIQ TALSSLFQED FSSGRQIMDH QNNPPSSSSS  180
SLRSLSTTAG SPEYSSLLFN IPPAGATAGA IVPNTMSPLS SNTQSALLTN YVFPSHHQEI  240
ENETLMRVFL NAISPQQHQN LPYNITVVHP ESSAFKRYRT EPEPGPERAP ESLRSRQSLM  300
KRSLAFFRSI NAMRIRERIQ ATRPSSTQLH HMIAERRRRE KLNDNFQALR ALLPPGTKKD  360
KASILTTAKE TLSSLMAEIE KLRIRNHELE SRLPESSKES SAADQEISKT MLLVPPNERF  420
HVQISDVPQS SSSSSSEERR VDLHVALRGQ ISQIDAVIRL LEFLKLAQNV SLITMRTNTN  480
NVGQGNNNYI NQLTFRLRIL EVCYLSFIKM HVLIVTC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1334339ERRRRE
2335340RRRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.023N4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015954671.10.0putative transcription factor bHLH041
TrEMBLA0A445DX530.0A0A445DX53_ARAHY; Uncharacterized protein
STRINGGLYMA15G18580.21e-173(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.18e-58bHLH family protein