PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.04S25
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CAMTA
Protein Properties Length: 70aa    MW: 8271.71 Da    PI: 7.5048
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.04S25genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-142.81e-1363775106
         CG-1  75 vggvevlycyYahseenptfqrrcywlLeeel 106
                  vg+v+vl+cyYah+e+n++fqrr+yw+Le  l
  Aradu.04S25   6 VGSVDVLHCYYAHGETNEKFQRRSYWMLEPIL 37 
                  899*************************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143721.301154IPR005559CG-1 DNA-binding domain
PfamPF038591.8E-9635IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
MLFCSVGSVD VLHCYYAHGE TNEKFQRRSY WMLEPILAEV ENFARFWLKL KTLLLIALAS  60
YLIKLHAEYS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.04S25
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020975837.18e-16calmodulin-binding transcription activator 1-like isoform X1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.24e-15ethylene induced calmodulin binding protein