PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.07ABD
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 268aa    MW: 30699.1 Da    PI: 9.5043
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.07ABDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.21.8e-25110201191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fY++Y++  GF +r+ k+ ++ +ng i+++t+ C++eg+r+++  + + ++r+++++tr+gC a++++k+++  gkw+v+++  +HnHel p
  Aradu.07ABD 110 RFYEQYSRGKGFAMRVGKKLRN-KNGDIVRYTYLCNREGFRQKKWLElEGRKREHKVVTRCGCMAEMRIKQNDqMGKWYVSRFIDDHNHELLP 201
                  5*****************9999.7777****************9888678889999****************999***************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.2E-23110201IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
PAAGSHVNHR SHINLAVPSR VEVRHCRRSV RSSHLLERAV IVFNVPLSTP PCPVIVSSET  60
SLDIGMDEAA FGTEYLDGDG DLGSDVRGSG LTRPEEVMEM LFNSPDEAAR FYEQYSRGKG  120
FAMRVGKKLR NKNGDIVRYT YLCNREGFRQ KKWLELEGRK REHKVVTRCG CMAEMRIKQN  180
DQMGKWYVSR FIDDHNHELL PPKLVEYLPP HRKMSDVDVA HMDSLRQVGI SVPKIYESLA  240
AQAGGFDHIP FTKRDMYNEV RRQRGMRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.07ABD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015948569.11e-150protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Y3D71e-141A0A444Y3D7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-25FAR1-related sequence 5