PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.0HG1Q
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 446aa    MW: 51252.8 Da    PI: 8.0506
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.0HG1QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.24.5e-0738814991
         FAR1 49 ekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 + +++t+++  ++C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.0HG1Q 38 SPTEKTNPTAGVNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 81
                 45789999************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.9E-53881IPR004330FAR1 DNA binding domain
PROSITE profilePS509669.186225261IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MDHSTSDCQL NPGEVDYEFE SNEVPETFGE GKWKYKISPT EKTNPTAGVN CPARIYIHTL  60
KDVGAWIISK VVLDHSHPCC PSEAEMLKQH RELSMSIRRT IENNDEVDRH IWVPIYLHHH  120
FWAGMRSTQR SESMHSFFNK YITRNSSEQA ERESDAADFH TVIPCATKSS IEAQFQDAYT  180
HAKFREVQAQ FRGKANCITR LKNSALGYSV YEVGEQVSSS MFNKFTVTYD SVAGEVKCQC  240
LLFESRGILC RHELSVLSFE QVSQVSPRYI LERWNKKVKR RHTHIKSSHD EPLMEPRSKR  300
FDQLVFRSQN ICEFAYESEE LTAILHRAYD NTMAEMEALK AKRKGTSSLS HEDANLESVN  360
ELQSPPRIRT RGRPKNRLGS KLEKQIANAT KKKKTKVLSE LMRECYIQIN LFDAASAAHS  420
NCSQYQGHVI NYQFRVPAVE DNSLGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.0HG1Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997233.10.0protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A445B3W80.0A0A445B3W8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.22e-25far-red elongated hypocotyls 3