PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.0I740
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 299aa    MW: 33577.5 Da    PI: 10.0051
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.0I740genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.91.6e-19137170134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  Aradu.0I740 137 CSDCHTTKTPLWRSGPRGPKSLCNACGIRQRKAR 170
                  *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004013.2E-20131182IPR000679Zinc finger, GATA-type
SuperFamilySSF577164.75E-13134171No hitNo description
Gene3DG3DSA:3.30.50.101.0E-15135170IPR013088Zinc finger, NHR/GATA-type
PROSITE profilePS5011412.519135167IPR000679Zinc finger, GATA-type
CDDcd002021.68E-14136168No hitNo description
PROSITE patternPS003440137162IPR000679Zinc finger, GATA-type
PfamPF003202.9E-17137170IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007623Biological Processcircadian rhythm
GO:0009416Biological Processresponse to light stimulus
GO:0009735Biological Processresponse to cytokinin
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0009910Biological Processnegative regulation of flower development
GO:0010187Biological Processnegative regulation of seed germination
GO:0010380Biological Processregulation of chlorophyll biosynthetic process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
AEKIHVPSSG GSWDHIHDHR KKEEKEEEEE KDGNKKSSKL LKLKILKKEE RNENHHLDNQ  60
AHHDEEDHGS VKWMSSKMRI MGGSDTNNFR LRFDEEGPKQ QAPLSPLGTD NSSSNSSNNN  120
SSSNRHENNN NMIVRVCSDC HTTKTPLWRS GPRGPKSLCN ACGIRQRKAR RAAAVAAAAE  180
VAASENDTTL MASTDDDDGM KKKEKKLHKH NNKDKKLKAK CSAPNQLKKK HKIGTNNNNN  240
TNKLSHRGRK KVGFEDLTIS LSKNLALNVF PHDEKEAAIL LMALSYGLLH GFPSDRYLD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.0I740
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015954445.10.0GATA transcription factor 21
TrEMBLA0A445DX180.0A0A445DX18_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19923484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.14e-19GATA family protein