PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.0K58L
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 228aa    MW: 26186.8 Da    PI: 7.7996
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.0K58LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-112271455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                   +++Er+RR+++++ +++L +llP+ +   p + l   +   +Av+YIksL+
  Aradu.0K58L 22 ERKIIERNRRNKMKDLYSKLNSLLPSyS---PTEVLPLPDQIDEAVKYIKSLE 71
                 5689**********************55...8888****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.89E-121786IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.0111870IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.35E-62070No hitNo description
Gene3DG3DSA:4.10.280.101.8E-102087IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.8E-82271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.3E-42476IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MDHHQQQQHQ QGSEPSTTTK VERKIIERNR RNKMKDLYSK LNSLLPSYSP TEVLPLPDQI  60
DEAVKYIKSL EKKVKMAKEK KERLLKGRNN KKRSRGFDEK NITKSPMIDV HEMGNSLLQV  120
VLTCGFENKF LFNEIIRILH EEKVEIVSVN SSSQPGDSMI HVLHAEIPSA FQQFGAARVS  180
ERLKRFVNGS ISDVDIDPGF WDDFEIDTDI WELPDLSSVV SKGFPNPL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.0K58L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936246.11e-168transcription factor bHLH162-like
TrEMBLA0A445BXX71e-146A0A445BXX7_ARAHY; Uncharacterized protein
STRINGGLYMA12G12880.11e-81(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-25bHLH family protein