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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Aradu.0K64L |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
BBR-BPC |
| Protein Properties |
Length: 292aa MW: 33011.8 Da PI: 9.4382 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.0K64L | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 308.2 | 2.8e-94 | 18 | 292 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllall 85
mddd + n+gyyep +lglqlm +++rd+k+ r+ + l ++++++++rd +++ rd+++++ ++++++++
Aradu.0K64L 18 MDDDMLNMTNWGYYEPF--KGGHLGLQLMPGMTDRDTKPfmpgRDPTM-LVNTNGTFHPRDcvvseaqmpINY-VRDSWISQ--------RDRFFNMQ 103
899977779******98..4579******************9888888.9***********777777766666.67777777........789***** PP
GAGA_bind 86 lvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesa 183
+++ + + vl++t+ + + q+++++ r+e+ +++ + ++e + +k++ r +++pk+kk +k+k+ +++++
Aradu.0K64L 104 PTNPN--------YPVLPETSAAPT-------QITQPPDTSRDEKADIVEE--TVQKEGVQPRKRQGRVASTTPKAKKPRKPKD-------NSNAPV- 176
*6554........889999999883.......3344444433333222222..2233444555555566777888888888887.......344455. PP
GAGA_bind 184 derskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsn 281
+ + ++ k+i++v+ng+++D+s+lP+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+s krrgaRiagrKmSqgafkk+LekLaaeGy+++n
Aradu.0K64L 177 -Q-RSKPMKTIEFVINGIDMDISSLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSTYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFGN 272
.2.345789***************************************************************************************** PP
GAGA_bind 282 pvDLkdhWAkHGtnkfvtir 301
p+DL++hWA+HGtnkfvtir
Aradu.0K64L 273 PIDLRNHWARHGTNKFVTIR 292
*******************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MDFEKCFQFM FPCNGVVMDD DMLNMTNWGY YEPFKGGHLG LQLMPGMTDR DTKPFMPGRD 60
PTMLVNTNGT FHPRDCVVSE AQMPINYVRD SWISQRDRFF NMQPTNPNYP VLPETSAAPT 120
QITQPPDTSR DEKADIVEET VQKEGVQPRK RQGRVASTTP KAKKPRKPKD NSNAPVQRSK 180
PMKTIEFVIN GIDMDISSLP IPVCSCTGTP QQCYRWGCGG WQSACCTTNV STYPLPMSMK 240
RRGARIAGRK MSQGAFKKVL EKLAAEGYNF GNPIDLRNHW ARHGTNKFVT IR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
