PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.14PP5
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 359aa    MW: 41480.3 Da    PI: 8.7467
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.14PP5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.32.2e-121886169
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvk 69
                 +fYn+YA    F +rk+   +  ++g+i++r++vC+keg r+ +  + ++++r+ r+ trt+C a+l+ +
  Aradu.14PP5 18 QFYNAYACWHRFVMRKNDVVRD-NQGRIISRQLVCNKEGWRNMSYLDlDDRSREARSLTRTKCPARLRNN 86
                 6****************99998.8888***************999887889999***********99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.9E-101884IPR004330FAR1 DNA binding domain
PROSITE profilePS509669.297155191IPR007527Zinc finger, SWIM-type
Gene3DG3DSA:4.10.60.106.9E-6232240IPR001878Zinc finger, CCHC-type
SuperFamilySSF577569.0E-7293325IPR001878Zinc finger, CCHC-type
Gene3DG3DSA:4.10.60.106.9E-6302322IPR001878Zinc finger, CCHC-type
PROSITE profilePS501588.614307322IPR001878Zinc finger, CCHC-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MVDDIWNLEF RIEDEACQFY NAYACWHRFV MRKNDVVRDN QGRIISRQLV CNKEGWRNMS  60
YLDLDDRSRE ARSLTRTKCP ARLRNNLIDF MHNLDRALKE YRNNELIADF KSQCSEPVMI  120
TSLERVGALN IKVLSITLDK VEFSVTALED PAKDRRVKLD RSKNLFSCSC KLFESRGICC  180
SHVFCATKFE NILEFPDSLI YKRWTKNAKN EFISTEIPVN DDVERVLKFR VGALASNCNK  240
LCDIACKDLA DFDEVQSELV KLVIRLQSRK QGKSTPNVDV EGINDPFVVK SKGAPSKRSS  300
WRKKRACSNC HKYGHYYKRC PDLMQHSVQG NPCDRSETNA SAKDSGFSPE RFANSSRSF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.14PP5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936250.10.0protein FAR1-RELATED SEQUENCE 9-like
TrEMBLA0A445BN500.0A0A445BN50_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF845424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-11FAR1-related sequence 5