PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.14Z9Y
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 205aa    MW: 23688.6 Da    PI: 8.4943
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.14Z9YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-18756255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + g
  Aradu.14Z9Y  7 RYRGVRQRH-WGSWVSEIRHP-----IlkTRIWLGTFETAEDAARAYDEAARLMCG 56
                 69******9.**********8.....556**********************87765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.04E-34664No hitNo description
PROSITE profilePS5103221.101764IPR001471AP2/ERF domain
SMARTSM003802.9E-39770IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-33764IPR001471AP2/ERF domain
PfamPF008471.1E-11756IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-21765IPR016177DNA-binding domain
PRINTSPR003673.5E-11819IPR001471AP2/ERF domain
PRINTSPR003673.5E-113046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MARSQQRYRG VRQRHWGSWV SEIRHPILKT RIWLGTFETA EDAARAYDEA ARLMCGARAR  60
TNFPFNPNTT NNVSQSSSSK LLSPTLTAKL HRCYMASLQL TRQQDPQRVL VPNHNDNHNN  120
SNYSKVQISE KGDSIVSSKK RTHDEEEEEV KQDSEANWVV KKVKGMDQIG PQFKPLEEHH  180
IDQMIEELLH YGSIELCSVF PHQHI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-18665161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-18869668ATERF1
3gcc_A3e-18869668ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138142KKRTH
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00526DAPTransfer from AT5G25190Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.14Z9Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015972055.11e-155ethylene-responsive transcription factor ERF003
SwissprotQ94AW52e-71ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A445CWH31e-111A0A445CWH3_ARAHY; Uncharacterized protein
STRINGXP_009363957.19e-85(Pyrus x bretschneideri)
STRINGXP_008378704.18e-85(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-43ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]