PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.15QQT
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 135aa    MW: 16189.7 Da    PI: 9.9877
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.15QQTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.52.8e-3271181111
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                  lp+G+rF+Pt+eel+v+yL++k  +++ e++++++++d+y+++PwdLp + kvk +++ew+fF + ++   ++kr n +t++gyWk tgk++ v+++ 
  Aradu.15QQT   7 LPVGYRFRPTEEELLVHYLNNKHLRNDAEIKNTVSQIDLYNFDPWDLPeQsKVKWDDQEWFFFNELKHI--KNKRCNGKTNAGYWKITGKERIVKRTg 102
                  799***************************999**************95257788999*****998765..56799999***********99999975 PP

          NAM  96 kgelvglkktLvfykg 111
                   ++++g+k+tLvfyk 
  Aradu.15QQT 103 IDNVIGTKRTLVFYKR 118
                  5677**********53 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-314119IPR003441NAC domain
PROSITE profilePS5100533.6767135IPR003441NAC domain
PfamPF023652.1E-188129IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MTETTILPVG YRFRPTEEEL LVHYLNNKHL RNDAEIKNTV SQIDLYNFDP WDLPEQSKVK  60
WDDQEWFFFN ELKHIKNKRC NGKTNAGYWK ITGKERIVKR TGIDNVIGTK RTLVFYKRPH  120
SVKPIGFFMN IMHFI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-22712317132NO APICAL MERISTEM PROTEIN
1ut4_B3e-22712317132NO APICAL MERISTEM PROTEIN
1ut7_A3e-22712317132NO APICAL MERISTEM PROTEIN
1ut7_B3e-22712317132NO APICAL MERISTEM PROTEIN
3swm_A3e-22712320135NAC domain-containing protein 19
3swm_B3e-22712320135NAC domain-containing protein 19
3swm_C3e-22712320135NAC domain-containing protein 19
3swm_D3e-22712320135NAC domain-containing protein 19
3swp_A3e-22712320135NAC domain-containing protein 19
3swp_B3e-22712320135NAC domain-containing protein 19
3swp_C3e-22712320135NAC domain-containing protein 19
3swp_D3e-22712320135NAC domain-containing protein 19
4dul_A3e-22712317132NAC domain-containing protein 19
4dul_B3e-22712317132NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.15QQT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016185093.13e-75NAC domain-containing protein 14-like
RefseqXP_025631883.13e-75NAC domain-containing protein 14-like isoform X1
TrEMBLA0A445ACS46e-74A0A445ACS4_ARAHY; Uncharacterized protein
STRINGAES844661e-35(Medicago truncatula)
STRINGAES846273e-35(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.25e-30NAC 014