PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.16UTS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 505aa    MW: 57207.7 Da    PI: 6.9635
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.16UTSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.36.9e-15163250190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fY +YAk+vGF  ++++++  +++++ +++   C++eg+ +++ k+      +++   +gC+a++  k ++ ++ w++ k+el+H+H+++
  Aradu.16UTS 163 DFYVTYAKKVGFISKIRATNFDRMTKQPINQSIHCNREGFWASRVKA---PIWKNTMAGVGCRARIYAKFDReKHDWVLLKVELNHSHPCS 250
                  6*******************************************999...88899999***********999899*************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-12163250IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
GTSTRCISSP YLISLAVVLP NKEGSLPSPP QPTLPSLFQR PAAPQVEKNF FTTPVNLCTV  60
QPGVGHRDHA LCSPCSPRSP PITTILVEHN SVEPSCLVPV SFTGDSFDGE SEQLDKAIEY  120
TKITELECDD TKLVDELPDH SCLADDEIPR VGMWFEHSKL AQDFYVTYAK KVGFISKIRA  180
TNFDRMTKQP INQSIHCNRE GFWASRVKAP IWKNTMAGVG CRARIYAKFD REKHDWVLLK  240
VELNHSHPCS TRKAVHYHEN RELTMHAKCI IEFVHEFDNV LGTKEQKELE DNAVDSRGLI  300
PCSTRSAIER QFQKEYTNEM FRDVQTEFSK KADCTIRAVD EQGNSARVKV EEEILVYETT  360
RYVTFDIHFD RLTHEEFVDC DDEADMLHNV LEDVRAKLVD YRGKMRNNTV ATAHNSIITG  420
PSTVFGTEDI QAPSKVTTKS RPKGKRLGYE LDKSIRKSMQ RKRKSVRKDN RVESAVNQAS  480
EAFAQQIAKQ GLGGFMSLLN SFDNT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1459464QRKRKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.16UTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016199157.21e-121protein FAR1-RELATED SEQUENCE 6-like
RefseqXP_025651864.11e-121protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A445EC871e-161A0A445EC87_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2336722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.26e-11FAR1 family protein