PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.17BVG
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 362aa    MW: 42616.8 Da    PI: 9.327
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.17BVGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.26.5e-141197191
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 +fY++Y+k + Fs++++++++    ++i+++ +vCs+e + +++ +    + + +++   +C+a++ v+ +k  g w  +k++l+H+H+++p
  Aradu.17BVG 11 NFYKHYSKLASFSTKIRNTTRD--GDKIKNQLLVCSRERRWKSKISP---TLKINPSAGLNCQARIYVHIMKdVGLWTFSKVVLNHSHPCCP 97
                 6****************98777..8889**********999998766...89999****************999***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.4E-111197IPR004330FAR1 DNA binding domain
PROSITE profilePS509668.679256292IPR007527Zinc finger, SWIM-type
SMARTSM005750.0044267294IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MIFKTLEEPK NFYKHYSKLA SFSTKIRNTT RDGDKIKNQL LVCSRERRWK SKISPTLKIN  60
PSAGLNCQAR IYVHIMKDVG LWTFSKVVLN HSHPCCPDQA EMLKQHRELS MFVRHTIETH  120
EEAGIRPSKT YQSFVAATDS HREVELYEVR HIWIPVYLDH YFWAGMRSTQ RSESMHLFFN  180
NKEQAEREFD AADFHIVISC TTKPAIEAQF QRVYTHENFR EVQAQFRGKV NCITRSMHST  240
LGQTSYEVSN STFNKFVVTY DAVSRDVKCY CLLFESRGIL CRHSLSILCF ERVDNVAPKY  300
ILECWSKNIK RRHTHIKSNQ HEPVLVPRSK RFDELVFRSY NICKFASESE ELIGILHRAF  360
DK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.17BVG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015960283.11e-146protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A445B0360.0A0A445B036_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.14e-24FAR1 family protein