PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.19EUZ

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 620aa MW: 70204.1 Da PI: 8.9579

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.19EUZ	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.3	3.6e-25	140	230	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYneY++ GFs+r+ k+ k+ +ge++++t+ C++eg+r+++ + ++++r+++++tr+gC a++++k++ +gkw+v++++ eHnHe + Aradu.19EUZ 140 RFYNEYGRARGFSIRQGKKIKN-SKGEFVRYTYLCNREGFRDKKWLEkSDRKREHKVVTRCGCLAEMRIKRKAeSGKWYVSRFVDEHNHEAV 230 5***************9998.7788**********9997653678889999***********99*************965 PP
2	FAR1	79.4	6.4e-25	344	434	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYneY++ GF +r+ k+ k+ +ge++++t+ C++eg+r+++ + ++++r ++a+tr+gC a++++k++ +gkw+v++++ eHnHe + Aradu.19EUZ 344 RFYNEYGRAKGFAIRQGKKIKN-SKGEFVRYTYLCNREGFRDKKWLDkSDRKRDHKAVTRCGCLAEMRIKRKAgSGKWYVSRFVDEHNHEAV 434 5***************9998.7788**********99976646788889**************9*************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.4E-23	140	230	IPR004330	FAR1 DNA binding domain
Pfam	PF03101	7.3E-23	344	434	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence Send to blast
MTGVSIFVKD KNSPNNRAHQ QAGFCRVSTA SKLIAAVTAA GDRVSATSGG GALLRMASSS 60 RKPHDHCKGS ADTAQVGSER QELVHDEEET CLDTMIEADD FDRDNVDKCV GLANSFVESE 120 VLRAEDVLHM EFNNPEEASR FYNEYGRARG FSIRQGKKIK NSKGEFVRYT YLCNREGFRD 180 KKWLEKSDRK REHKVVTRCG CLAEMRIKRK AESGKWYVSR FVDEHNHEAV PARYLLGPER 240 VDVNQTGDMT AFYRTRLLRM ASSSRKLHDH CKRSADTIQV GSERQDLVDD EEETSLDTVN 300 EPDDIDGDNV DKCVRLDDGF IESEVLRAED VLHMEFNDPE EASRFYNEYG RAKGFAIRQG 360 KKIKNSKGEF VRYTYLCNRE GFRDKKWLDK SDRKRDHKAV TRCGCLAEMR IKRKAGSGKW 420 YVSRFVDEHN HEAVPPRYLL GPGRVVNQTG DMTALYRTRV DAFVHLCKRL AKAACLTDED 480 YKLYTDRILR DTILLEIKNG LGVEVVRGSN VNAEVAKDPI HVGTKGTGCA NEASGSKGTK 540 KRKCSTWGRR GHRRTRFPNG SPSAALPGED AVQDRTGHRL QNLEFLCLGN IARGVMGQQE 600 FVKRKRTVDF LPPVSFAKFL

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence Send to blast

MTGVSIFVKD KNSPNNRAHQ QAGFCRVSTA SKLIAAVTAA GDRVSATSGG GALLRMASSS  60
RKPHDHCKGS ADTAQVGSER QELVHDEEET CLDTMIEADD FDRDNVDKCV GLANSFVESE  120
VLRAEDVLHM EFNNPEEASR FYNEYGRARG FSIRQGKKIK NSKGEFVRYT YLCNREGFRD  180
KKWLEKSDRK REHKVVTRCG CLAEMRIKRK AESGKWYVSR FVDEHNHEAV PARYLLGPER  240
VDVNQTGDMT AFYRTRLLRM ASSSRKLHDH CKRSADTIQV GSERQDLVDD EEETSLDTVN  300
EPDDIDGDNV DKCVRLDDGF IESEVLRAED VLHMEFNDPE EASRFYNEYG RAKGFAIRQG  360
KKIKNSKGEF VRYTYLCNRE GFRDKKWLDK SDRKRDHKAV TRCGCLAEMR IKRKAGSGKW  420
YVSRFVDEHN HEAVPPRYLL GPGRVVNQTG DMTALYRTRV DAFVHLCKRL AKAACLTDED  480
YKLYTDRILR DTILLEIKNG LGVEVVRGSN VNAEVAKDPI HVGTKGTGCA NEASGSKGTK  540
KRKCSTWGRR GHRRTRFPNG SPSAALPGED AVQDRTGHRL QNLEFLCLGN IARGVMGQQE  600
FVKRKRTVDF LPPVSFAKFL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.19EUZ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020986200.1	0.0	protein FAR1-RELATED SEQUENCE 7 isoform X2
TrEMBL	A0A445BMM1	0.0	A0A445BMM1_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9185	2	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	5e-20	FAR1-related sequence 12