PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.1D4XY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 288aa    MW: 31746.8 Da    PI: 10.0123
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.1D4XYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.68.6e-1030843386
     trihelix 33 evskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
                 +v++++      ++p+qC++k+e+l+kry+ + +++++   ++  s++++f+ ++
  Aradu.1D4XY 30 AVAQRCPNASPAKTPVQCRHKMEKLRKRYRTEIQRARSLpVARFNSSWVHFKLMD 84
                 789999999999**************************97799999******997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.2E-92686No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MASPSSPPQS TPPPDPPSAL PLALPEVADA VAQRCPNASP AKTPVQCRHK MEKLRKRYRT  60
EIQRARSLPV ARFNSSWVHF KLMDSMEKGP SPVKPENDSD SHDGDGVGVD RDEDDDDQDL  120
YEEIKNGGHG SNTRSLNKLY RNGFGGPPGG GNGSGGFRIR IPTGLSVAQP GSKFYGKSGG  180
NQKFNNPNLN QNAGSNFGTR VLGKRERERE RDPVGEVVSA IKLLGDGFVR MEQMKMEMAR  240
EIEAMRMEME MKRTEMILES QQRIVEAFAK AVSDKKKKPK KTPSPQQS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.1D4XY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015964711.10.0trihelix transcription factor ASIL2
RefseqXP_020978926.10.0trihelix transcription factor ASIL2
RefseqXP_025654008.10.0trihelix transcription factor ASIL2
RefseqXP_025699778.10.0trihelix transcription factor ASIL2
TrEMBLV7CA261e-110V7CA26_PHAVU; Uncharacterized protein
STRINGXP_007154189.11e-111(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46382838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.15e-46Trihelix family protein