PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.1ES3P

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bZIP

Protein Properties

Length: 431aa MW: 46815.8 Da PI: 6.4589

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.1ES3P	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.3	3.8e-09	233	291	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l se+ Aradu.1ES3P 233 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSEN 291 9**********************************************999988888876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-15	229	293	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.001	231	294	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.3E-9	233	291	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.3E-10	233	288	No hit	No description
SuperFamily	SSF57959	1.97E-10	233	287	No hit	No description
CDD	cd14703	7.27E-27	234	283	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence Send to blast
MDKDKPLVHG GGLPPPSGRY PGYSPTGNAF NVKSEPSSSS SYPPMVPGSS PDSSHFGHGM 60 SSDSSGFSHD ISRMPDNPPR NRGHRRAHSE ILTLPDDISF DSDLGVVGGA DVPSFSDDTE 120 EDLLSMYLDM DKFNSSSATS TFQMGEPSNA AAASGSAPTS APASGGPTSS AENSVLGNNE 180 RPRVRHQHSQ SMDGSTTIKP EMLVSGSEDI SAADSKKAMS AAKLAELALI DPKRAKRIWA 240 NRQSAARSKE RKMRYIAELE RKVQTLQTEA TSLSAQLTLL QRDTNGLNSE NNELKLRLQT 300 MEQQVHLQDA LNDALKEEIQ HLKILTGQAM PPNNGGPMMN FASFGGGQQF YPNNHAMHTL 360 LAAQQFQQLQ IHPQKQQQQH QFQQLQQQML QQQQEQMHQQ SGELKIRSST PSPGPKDNAS 420 SDVNPSMGKD C

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence Send to blast

MDKDKPLVHG GGLPPPSGRY PGYSPTGNAF NVKSEPSSSS SYPPMVPGSS PDSSHFGHGM  60
SSDSSGFSHD ISRMPDNPPR NRGHRRAHSE ILTLPDDISF DSDLGVVGGA DVPSFSDDTE  120
EDLLSMYLDM DKFNSSSATS TFQMGEPSNA AAASGSAPTS APASGGPTSS AENSVLGNNE  180
RPRVRHQHSQ SMDGSTTIKP EMLVSGSEDI SAADSKKAMS AAKLAELALI DPKRAKRIWA  240
NRQSAARSKE RKMRYIAELE RKVQTLQTEA TSLSAQLTLL QRDTNGLNSE NNELKLRLQT  300
MEQQVHLQDA LNDALKEEIQ HLKILTGQAM PPNNGGPMMN FASFGGGQQF YPNNHAMHTL  360
LAAQQFQQLQ IHPQKQQQQH QFQQLQQQML QQQQEQMHQQ SGELKIRSST PSPGPKDNAS  420
SDVNPSMGKD C

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00126	DAP	Transfer from AT1G06070	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.1ES3P

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015935496.1	0.0	probable transcription factor PosF21
Refseq	XP_025613761.1	0.0	probable transcription factor PosF21
Swissprot	Q04088	1e-155	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	A0A445BV43	0.0	A0A445BV43_ARAHY; Uncharacterized protein
STRING	EMJ23579	0.0	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5517	32	49

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-141	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]