PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.1M0AQ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 416aa    MW: 47110.7 Da    PI: 8.5654
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.1M0AQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH292e-09291336454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   h + ErrRR++ N++f eLr llP+      +K  K+++L  A e +ksL
  Aradu.1M0AQ 291 HHIILERRRRENENKCFRELRALLPPG-----TKKHKSSVLIAAKEALKSL 336
                  6999*********************97.....7999********9999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.72E-13285352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.56287336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.46E-8287336No hitNo description
Gene3DG3DSA:4.10.280.102.4E-10291352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.3E-7291336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-7293342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MDGVFNLPEA TRSDFLRSLM HTFGCTYICL WHCHSSSKCS NLLFLDGIYN NVSSTVAEET  60
LFNLYQRLTF DAANDEWVPG AAFRRHMAYL ELQQLDLLRL ASAVIQTQFY LEARIETAIF  120
MGCSKGEIEL GFEFEFHSLY VQIDMKAAVK SLFPEDFSRE QIHHPASSSS CSCPSDEFSS  180
LGGVLLPAPE GEQEAIIRAI LHVISSSSSP ATTTSQPPPY NNSAFRAYPS TTYNLVTSSS  240
RRFSLMKRSI EFSRTLHLMR IRDRFHFQRQ HQPPHPLIIG TQNANNNKHL HHIILERRRR  300
ENENKCFREL RALLPPGTKK HKSSVLIAAK EALKSLIAEI EKLNIRNQQL KTLLGSSSSS  360
YGNVHISSSP SSSNERLNVA VSHVAXXXXX XXXXXXXXXX XLSEEKARLI IINRIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1295300ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.1M0AQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025676738.10.0putative transcription factor bHLH041
TrEMBLA0A445AUN00.0A0A445AUN0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.12e-09bHLH family protein