PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.2A606

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

G2-like

Protein Properties

Length: 121aa MW: 13599.1 Da PI: 7.6309

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.2A606	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.4	3.8e-29	69	118	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtp+LH rF++av++LGG+e+AtPk +l+lm++kgL+++hvkSHLQ Aradu.2A606 69 PRLRWTPDLHLRFLHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQ 118 8************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.2E-25	65	118	IPR009057	Homeodomain-like
PROSITE profile	PS51294	10.559	65	121	IPR017930	Myb domain
TIGRFAMs	TIGR01557	3.8E-21	69	119	IPR006447	Myb domain, plants
SuperFamily	SSF46689	2.69E-13	69	119	IPR009057	Homeodomain-like
Pfam	PF00249	4.5E-9	70	118	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 121 aa Download sequence Send to blast
MEESHGSQCS KTSPSNLEEE EEDDDDKYEI NKNNGGGGGG CSSNSTVEEN SNNNNDKKKI 60 RPYVRSKFPR LRWTPDLHLR FLHAVQRLGG QERATPKLVL QLMNIKGLSI AHVKSHLQVI 120 N

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-17	70	118	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-17	70	118	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-17	70	118	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-17	70	118	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-17	70	118	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-17	70	118	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-17	70	118	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-17	70	118	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-17	70	118	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-17	70	118	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-17	70	118	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-17	70	118	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.2A606

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015950480.1	1e-81	two-component response regulator ORR22-like
Refseq	XP_025655483.1	1e-81	two-component response regulator ORR22
Swissprot	Q700D9	9e-26	MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBL	A0A445EAY2	2e-80	A0A445EAY2_ARAHY; Uncharacterized protein
STRING	GLYMA01G31044.1	1e-49	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2378	34	82

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-34	G2-like family protein