PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.2Q989
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 439aa    MW: 50053.8 Da    PI: 9.4487
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.2Q989genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.54.4e-1851137191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +    +++t+++  ++C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.2Q989  51 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGVNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 137
                  6***************998776..8889*************998877...8999**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.9E-1551137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MDHSTSDCQL NPGEVDYEFE SNEVPEPLSV VDDELVPKVG MTFATLEDAG KFYRNYAKAA  60
GFSTRVRCTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN PTAGVNCPAR IYIHTLKDVG  120
AWIISKVVLD HSHPCCPSKA EMLKQHRELS MSIRHLYEDR HIWVPIYLDH HFCAGMRSTQ  180
RSESMHSFFN KYITQNSSLI QFVKQYDNCL GSRDFKMRDA YTHAKFREVQ AQFRGKANCI  240
TRLKNFALGY SIYEVGEQVS SSIFNKFAVT YDSVAAEKVK RRHTHIKSSH DEPLMEPRSK  300
RFDQLVFRSQ NICEFSSESE QLTAILHRAY DNAMAEMEAL KAKRKGTSSL SHEDANLESV  360
NELQSPPRIR TRGRPKNRLG SKLEKQIANA TKKKKTKVLS EINLFDAALA AHSNCRQYQG  420
HVINYQFRVP AAGDNSLGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.2Q989
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-161HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997233.11e-164protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A445CSB70.0A0A445CSB7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.22e-12far-red elongated hypocotyls 3