PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.315HW
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 440aa    MW: 47170.1 Da    PI: 7.0209
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.315HWgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1711.8e-22295357163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+elkrerrkq+NRe+ArrsR+RK+ae eeL++kv++L+aeN +Lk+e+++l++ ++kl+ e+
  Aradu.315HW 295 ERELKRERRKQSNRESARRSRLRKQAEAEELARKVENLTAENVSLKSEINQLSESSEKLRVEN 357
                  89*********************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077778.0E-3616114IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.2E-25148274No hitNo description
Gene3DG3DSA:1.20.5.1709.7E-18288354No hitNo description
SMARTSM003381.3E-21295359IPR004827Basic-leucine zipper domain
PfamPF001702.4E-20295357IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.484297360IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.88E-10298354No hitNo description
CDDcd147024.10E-20300348No hitNo description
PROSITE patternPS000360302317IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MCRITVVGFS FGAYLMGNSE EGKSTKIEKS SSPVATDQTN QTNQQNIHVY PDWSAMQAYY  60
GPRVNMPPYY NSAVANGHAP HPYMWGPPQP MMPPYGPPYA AIYSHGGVYA HPAVAIGPHA  120
HGQGLPTSPA AGTPSSVETP TKLSGNTDQG LMKKLKGFDG LAMSIGNGNT GSAERGAENR  180
LSQSVDTEGS SDGSDGNTAG TNQTRKRRRD GTPTTDGEGK TEIQDSPAPK ENAANKTIAT  240
APISITGTLA APVVSSGMTT ALELMNPASL HPRTNSPNGP QPCAVMPSEA WIQNERELKR  300
ERRKQSNRES ARRSRLRKQA EAEELARKVE NLTAENVSLK SEINQLSESS EKLRVENTTL  360
REKLKNAQLG PADEIVLNNT DSNRATPVST ENLLSRVNNN SSSDDRTAEE TDFCENKSNS  420
GAKLHQLMDT NPRADAVAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204208RKRRR
2311317RRSRLRK
3311318RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.315HW
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015947981.10.0common plant regulatory factor 1
RefseqXP_025638079.10.0common plant regulatory factor 1
SwissprotQ990891e-143CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A151SSC10.0A0A151SSC1_CAJCA; Common plant regulatory factor 1
STRINGGLYMA16G03190.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-103G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]