PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.32F23

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 379aa MW: 43697.2 Da PI: 10.1906

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.32F23	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82	5.9e-26	242	291	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+l++l kyF+ pi +A++ L+v+lTvLKr+CR++GI+RWPhRkiksl Aradu.32F23 242 AKITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSL 291 78**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	19.52	226	311	IPR003035	RWP-RK domain
Pfam	PF02042	1.1E-21	243	291	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence Send to blast
QTRRSCTCKQ TPKPRLLSRC FSLLSPQRHC SCFVPNSDGS IFNLAMKNTL LTTLLVFKNT 60 IREELIRSVH VYQIKDGKVR EVEREFVFSE SGSYGEMRST PILRLQKKLC VAEVSEGYQN 120 GVWLCIFSFH RNHKPQFSSI PNLLLLSRNL KLRTIPTLLR DLRVIYKLEK DKDVLSDSTG 180 EERQGNNKDS QPLRKVVPVL TQDLNFLPYE DDMSESPDNK LDVQALPDSA EKKKRASSDR 240 VAKITLSELV KYFDIPIVEA SRRLNVGLTV LKRKCREFGI PRWPHRKIKS LDSLIHEIQE 300 EANNQESDDK AAALAAIEKR RMLESEKENI ERKPFMDIQS ETKKLRQDIF KRRHRARAQV 360 KHNSTVSGSS SSNKTTIET

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence Send to blast

QTRRSCTCKQ TPKPRLLSRC FSLLSPQRHC SCFVPNSDGS IFNLAMKNTL LTTLLVFKNT  60
IREELIRSVH VYQIKDGKVR EVEREFVFSE SGSYGEMRST PILRLQKKLC VAEVSEGYQN  120
GVWLCIFSFH RNHKPQFSSI PNLLLLSRNL KLRTIPTLLR DLRVIYKLEK DKDVLSDSTG  180
EERQGNNKDS QPLRKVVPVL TQDLNFLPYE DDMSESPDNK LDVQALPDSA EKKKRASSDR  240
VAKITLSELV KYFDIPIVEA SRRLNVGLTV LKRKCREFGI PRWPHRKIKS LDSLIHEIQE  300
EANNQESDDK AAALAAIEKR RMLESEKENI ERKPFMDIQS ETKKLRQDIF KRRHRARAQV  360
KHNSTVSGSS SSNKTTIET

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.32F23

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015951153.1	0.0	protein RKD5 isoform X2
TrEMBL	A0A444WWD1	0.0	A0A444WWD1_ARAHY; Uncharacterized protein
TrEMBL	A0A444WWK2	0.0	A0A444WWK2_ARAHY; Uncharacterized protein
TrEMBL	A0A445EU59	0.0	A0A445EU59_ARAHY; Uncharacterized protein
STRING	GLYMA01G36360.1	1e-158	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9646	30	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	8e-70	RWP-RK domain-containing protein