PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.33QAR
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 110aa    MW: 12343 Da    PI: 9.0997
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.33QARgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA64.21.5e-201549135
         GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                 C  C+tt+TplWR gpdg+++LCnaCGl+yrk+++
  Aradu.33QAR 15 CNDCHTTTTPLWRAGPDGPRSLCNACGLRYRKRRK 49
                 99******************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004011.6E-17968IPR000679Zinc finger, GATA-type
PROSITE profilePS5011414.035945IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.76E-151272No hitNo description
Gene3DG3DSA:3.30.50.107.0E-171349IPR013088Zinc finger, NHR/GATA-type
CDDcd002028.66E-151462No hitNo description
PROSITE patternPS0034401540IPR000679Zinc finger, GATA-type
PfamPF003202.5E-181549IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
KIMEVQVGAV SNRSCNDCHT TTTPLWRAGP DGPRSLCNAC GLRYRKRRKA LDKGGAKKSR  60
KRNNRATSEH DDEVDFGCNL EPYTLHGRSQ FKLKEEEEAA ILLMALSCAY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.33QAR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020981346.11e-76GATA transcription factor 15
RefseqXP_025604007.11e-76GATA transcription factor 15
TrEMBLA0A444YIQ75e-75A0A444YIQ7_ARAHY; Uncharacterized protein
STRINGXP_010268075.13e-25(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15693298
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-15GATA transcription factor 15