PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.3DA1Q

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 257aa MW: 29965.8 Da PI: 9.0558

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.3DA1Q	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.8	0.00045	37	55	12	30
HHHHHHHHHHHHHCTSCCC CS HLH 12 RRdriNsafeeLrellPka 30 RR+ iN+++ L+ l+P++ Aradu.3DA1Q 37 RRSGINEKIKALQHLIPNS 55 9****************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	9.4E-4	36	54	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence Send to blast
MELNPWLKIH ECRRVLKPWQ KMFQESLYLP VFLVEHRRSG INEKIKALQH LIPNSIKALV 60 IIFYFKLLNL FKFLTVLIAF TCSFCYRADV IQRKFDLEQK RLDEDAFVYN SLQQPLKFSQ 120 AYQKMFEVGA CMDKAKSHEL VENRDNEFAD ISFEELLAQK KKDSGCTKNM RNYLINLTKK 180 KSLLRNLDDV GKEMQVNDES GVVNCSGNGA NGVTERRTTE NERWLLVRAA ILKTDGEGVR 240 LRGKERVRID CYCPIGD

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.3DA1Q

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-