PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.3R22E
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 204aa    MW: 22392.6 Da    PI: 7.0984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.3R22EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-193885353
          AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                 y+GVr+++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+++ 
  Aradu.3R22E 38 YRGVRRRP-WGKYAAEIRDSTRNG--ERVWLGTFDTAEEAALAYDQAALAS 85
                 9*******.**********44465..*********************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.3E-143787IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-303795IPR001471AP2/ERF domain
SMARTSM003803.5E-3437101IPR001471AP2/ERF domain
PROSITE profilePS5103222.9323795IPR001471AP2/ERF domain
PRINTSPR003672.1E-113849IPR001471AP2/ERF domain
CDDcd000182.49E-293896No hitNo description
SuperFamilySSF541715.43E-233896IPR016177DNA-binding domain
PRINTSPR003672.1E-116177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0009873Biological Processethylene-activated signaling pathway
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MLLCEVLAQG SGGDAAENSS IEEVNSTMAA LQPQQASYRG VRRRPWGKYA AEIRDSTRNG  60
ERVWLGTFDT AEEAALAYDQ AALASRGSVA ILNFPAGMVV ESLEKMMMEC GGFSEGCSPV  120
LELKKKHSMK RKMENREKKL LMMMNTNNNN NHHNHNHVMD GGSGWGKAVV TLPVLKGGTQ  180
PNDDYIYAVC LVMSIIVECL HSIK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-2934951172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the GCC-box cis-acting elements found in the promoter regions of ethylene-responsive genes (PubMed:23057995). Acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates pathogen-responsive genes (PubMed:28733419). {ECO:0000269|PubMed:23057995, ECO:0000269|PubMed:28733419}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00374DAPTransfer from AT3G23240Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.3R22E
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and infection with the fungal pathogen Botrytis cinerea. {ECO:0000269|PubMed:28733419}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968197.13e-99ethylene-responsive transcription factor 1B-like
RefseqXP_025607254.13e-99ethylene-responsive transcription factor 1B-like
SwissprotA0A3Q7I5Y96e-47ERFC3_SOLLC; Ethylene-response factor C3
TrEMBLA0A445CP146e-98A0A445CP14_ARAHY; Uncharacterized protein
STRINGEMJ074864e-50(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31133199
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-35ethylene response factor 1
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Pirrello J, et al.
    Functional analysis and binding affinity of tomato ethylene response factors provide insight on the molecular bases of plant differential responses to ethylene.
    BMC Plant Biol., 2012. 12: p. 190
    [PMID:23057995]
  3. Du M, et al.
    MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato.
    Plant Cell, 2017. 29(8): p. 1883-1906
    [PMID:28733419]