PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.3T6VH

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 190aa MW: 21996.2 Da PI: 9.0911

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.3T6VH	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.8	2.4e-15	11	97	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++Y+k +GFs++++++++ ++i+++ vCs+e + +++ ++ + +t+++ +C a++ v+ +k g+ +++++l+H+H+++p Aradu.3T6VH 11 KFYKHYSKLAGFSTKIRNTTRD--GDKIKNQLIVCSREARWNSKISS---TLKTNPSAGLNCPARIYVHIMKdVGHRTISQVVLNHSHPCCP 97 6**************98776..8889*******99998877...999**************989*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.0E-12	11	97	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence Send to blast
MIFMTLEEAG KFYKHYSKLA GFSTKIRNTT RDGDKIKNQL IVCSREARWN SKISSTLKTN 60 PSAGLNCPAR IYVHIMKDVG HRTISQVVLN HSHPCCPDQA EMLKQHRELS MFILVYLDHH 120 FCAGMRSTQR SESMHAFFNK FITHDSSLRQ FVKQYDNCLA SREQREREFD ATDFHTMILC 180 ATKSAIEAPF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.3T6VH

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029145717.1	4e-68	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444WXS8	1e-102	A0A444WXS8_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-09	FAR1 family protein