PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.3T9SJ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 320aa    MW: 36717.6 Da    PI: 8.7938
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.3T9SJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.92.5e-1151117172
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +    +++t+++  ++C  ++ ++  k
  Aradu.3T9SJ  51 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGVNCPTRIYIHTLK 117
                  6***************998776..8889*************998877...8999*************98766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.2E-851117IPR004330FAR1 DNA binding domain
PROSITE profilePS509669.099252288IPR007527Zinc finger, SWIM-type
SMARTSM005750.0033263290IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MDHSISDCQL NPGEVDYEFE SNEVPEPLSV VDDELVLKVG MTFTTLEDAG KFYRNYAKAA  60
GFSTRVRCTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN PTAGVNCPTR IYIHTLKDVD  120
RHIWVPIYLD HHFWAGMRST QRSESMHSFF NKYITRSSSL IQFVKQYDNC LGSREQAERE  180
SDAADFHTVI PCATKSSIEA QFQYAYTHVK FREVQAQFRG KANCITRLKN SALGYSVYEV  240
VEQVSSSIFN KFAVTYDSVA AEVKCQCLLF ESRGILCRHT LSVLSFEQVS QVSPRYILER  300
WSKKVKRRHT HTSRAAMTSH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.3T9SJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020981527.11e-133protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A445A8500.0A0A445A850_ARAHY; Uncharacterized protein
STRINGXP_004490233.17e-55(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.28e-31far-red elongated hypocotyls 3