PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.3UE4N
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 340aa    MW: 37548.1 Da    PI: 8.1729
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.3UE4NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-1880129255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  Aradu.3UE4N  80 QFRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFSTAEEAARAYDAEARRIRG 129
                  69*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.7E-3880143IPR001471AP2/ERF domain
CDDcd000181.12E-3280138No hitNo description
Gene3DG3DSA:3.30.730.107.2E-3280138IPR001471AP2/ERF domain
PROSITE profilePS5103223.69680137IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-2180138IPR016177DNA-binding domain
PRINTSPR003673.4E-118192IPR001471AP2/ERF domain
PfamPF008474.5E-1181129IPR001471AP2/ERF domain
PRINTSPR003673.4E-11103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MCGGAIISDF IPGGSAAAAS RSRRVTADIL WPNLRKPGFG SFGSTKTAKP QLKARGPAAV  60
KSMEPSGQVE KSAKRKRKNQ FRGIRQRPWG KWAAEIRDPR KGVRVWLGTF STAEEAARAY  120
DAEARRIRGK KAKVNFPEEV PAASSKRFKP HPEMQLPKEK MNCAKPKLNN QMFDFGNELG  180
DFYSQLDQVE QKPLINQYAN MESFPGNGLL NASDDVAAYF TSEHSSNSFE YSDLSWGEQG  240
PKTPEISSML SAPVEVQGVA KQEKNMVQPN NTQDDSAKTL SEELADMESQ LKFFDTPYLD  300
ASWNDTSLES FLGVDSTQDV GNPMNLWSFD DLPSVGGGVF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-20801451480Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.3UE4N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF5372204e-64AF537220.1 Glycine max ethylene responsive protein (EREB) mRNA, complete cds.
GenBankBT0968144e-64BT096814.1 Soybean clone JCVI-FLGm-25F24 unknown mRNA.
GenBankJN4166024e-64JN416602.1 Glycine max cultivar Jilin 32 ethylene-responsive transcription factor 7 (ERF7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015948235.10.0ethylene-responsive transcription factor RAP2-12
TrEMBLA0A445EHA90.0A0A445EHA9_ARAHY; Uncharacterized protein
STRINGXP_007135380.11e-151(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48083252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.36e-54related to AP2 2