PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.46M2Y

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 813aa MW: 89573.7 Da PI: 6.2972

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.46M2Y	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.4	1.5e-28	563	614	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl +l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ Aradu.46M2Y 563 AEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 614 589***********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.37	553	634	IPR003035	RWP-RK domain
Pfam	PF02042	3.8E-24	567	614	IPR003035	RWP-RK domain
SMART	SM00666	7.1E-9	703	794	IPR000270	PB1 domain
PROSITE profile	PS51745	12.504	703	794	IPR000270	PB1 domain
SuperFamily	SSF54277	2.19E-13	735	796	No hit	No description
Gene3D	G3DSA:3.10.20.240	1.7E-13	735	791	No hit	No description
Pfam	PF00564	1.7E-10	736	793	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 813 aa Download sequence Send to blast
MEYGGIVHNE NGAFGSLSES AVEAEVDLVD ELLVEGCWVE TTSAGGCYNW MHNPSDAVVA 60 PQPQYLEMLQ LQLQEESSSS SSDQESLVGK RWWIGPTRPG PSSSSSSSSS VKERLVVAVG 120 YLKDYTKNNN LLIQIWVPPR RSPLPLPLPL PLDVLTFPNP SPNPNPNLCV RFLRSHEYSH 180 HYQAQQHYDL RGSIALPVFE RGTATCLGVL DILITNHLNL TNNYRPQLDN VCNALEAVDF 240 RSSHQNLNAN FMPPAIKVYE ELYQAALNEI VEVLTSVCKT QNLPLGLTWA PCIQQGKCGC 300 GHSSAMCVST VDTACYVGDL EMLGFQEACS EYHLFKGQGI VGTAFTSAKP CFAIDITAFS 360 RAEYPLSHLA NIFGLHAAVA IPLRSLYTGS ADFVLEFFLP KDCHDTEQQK HMLNSLSMLV 420 QQACRSLHVA TEDDFTPPML THHQAQAQIM EEACSKDQSW IAHMMEAQVQ QKGKGVCVSL 480 EYQMEEPKEE FKVTTNWDTA NDQAHHQLFS SSDFGHIDVL EHSRSRASTA VDGGEESYAL 540 GGRRSSSSGS GGRKSGDKRR TKAEKTISLP VLRQYFAGSL KDAAKSIGVC PTTLKRICRQ 600 HGITRWPSRK IKKVGHSLKK LQLVIDSVQG AEGAIQIGSF YASFPELSST DLSSRSESSP 660 SKKTHSTTIP HQNHNNNTFL KSPPSSACSQ TLDVVMTESS EAALLLKRAH SEAAELLQHA 720 SLQSQEDTKH NRSLEMARRF NLNDISISSS NIDLKYLDED GEWVLLACDA DLEECKDIHR 780 SSQSRTIRLS LFQASPLNHL ATNTFGNGTT SPS

Sequence ? help Back to Top

Protein Sequence Length: 813 aa Download sequence Send to blast

MEYGGIVHNE NGAFGSLSES AVEAEVDLVD ELLVEGCWVE TTSAGGCYNW MHNPSDAVVA  60
PQPQYLEMLQ LQLQEESSSS SSDQESLVGK RWWIGPTRPG PSSSSSSSSS VKERLVVAVG  120
YLKDYTKNNN LLIQIWVPPR RSPLPLPLPL PLDVLTFPNP SPNPNPNLCV RFLRSHEYSH  180
HYQAQQHYDL RGSIALPVFE RGTATCLGVL DILITNHLNL TNNYRPQLDN VCNALEAVDF  240
RSSHQNLNAN FMPPAIKVYE ELYQAALNEI VEVLTSVCKT QNLPLGLTWA PCIQQGKCGC  300
GHSSAMCVST VDTACYVGDL EMLGFQEACS EYHLFKGQGI VGTAFTSAKP CFAIDITAFS  360
RAEYPLSHLA NIFGLHAAVA IPLRSLYTGS ADFVLEFFLP KDCHDTEQQK HMLNSLSMLV  420
QQACRSLHVA TEDDFTPPML THHQAQAQIM EEACSKDQSW IAHMMEAQVQ QKGKGVCVSL  480
EYQMEEPKEE FKVTTNWDTA NDQAHHQLFS SSDFGHIDVL EHSRSRASTA VDGGEESYAL  540
GGRRSSSSGS GGRKSGDKRR TKAEKTISLP VLRQYFAGSL KDAAKSIGVC PTTLKRICRQ  600
HGITRWPSRK IKKVGHSLKK LQLVIDSVQG AEGAIQIGSF YASFPELSST DLSSRSESSP  660
SKKTHSTTIP HQNHNNNTFL KSPPSSACSQ TLDVVMTESS EAALLLKRAH SEAAELLQHA  720
SLQSQEDTKH NRSLEMARRF NLNDISISSS NIDLKYLDED GEWVLLACDA DLEECKDIHR  780
SSQSRTIRLS LFQASPLNHL ATNTFGNGTT SPS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.46M2Y

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015972752.2	0.0	LOW QUALITY PROTEIN: protein NLP2
TrEMBL	A0A444YG02	0.0	A0A444YG02_ARAHY; Uncharacterized protein
STRING	XP_004491641.1	0.0	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1237	33	99

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	1e-146	Nin-like family protein