PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.4707K
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 446aa    MW: 48032.4 Da    PI: 7.786
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.4707KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.12e-13208252345
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwq 45 
                      +W++eEd ll dav+++G g+W+tIa+  +   +Rt+kq+  rw+
      Aradu.4707K 208 AWSEEEDNLLRDAVQRFGEGHWATIAKGGNfpVKRTAKQIYQRWN 252
                      7**************************9999999**********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.472201259IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.6E-14202257IPR009057Homeodomain-like
SuperFamilySSF466894.95E-12204257IPR009057Homeodomain-like
SMARTSM007171.3E-10205257IPR001005SANT/Myb domain
PfamPF002497.4E-12208253IPR001005SANT/Myb domain
CDDcd116603.28E-13209251No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MTIPDKKPNK LVPFTEQDAA RIAQRYDATT VLTLLQEVAH AQCPNAKIDW NELVKRTSTG  60
ISNAREYQML WRHLAYGHAL LENLENGAEP LDDDSDLEYE VEALPPISPE VASETVACVK  120
VKVMIASLSE STPSSSTIEA PLTIHAPVCN SSKTSNKGSQ SSSLMQGTEI IFPVTIKRQT  180
LPAVSLTDNI ESKGLDGSNM ASKKRKIAWS EEEDNLLRDA VQRFGEGHWA TIAKGGNFPV  240
KRTAKQIYQR WNFLQKKDDS TNSGPILTST RYDTAEQQAT RHSLSLALDM PLKKLTAPGM  300
TSRTTLNMSG KNLLQHVATE SSPLHGHVVP PQHPSQGSFV GSCSSSLKST LVPGKPLLEV  360
HPTPNGTAKG ATIVSGAQIV STSDSGSQVK VSHRNVVATT SSCLTKSSTP ASLPPESKVQ  420
FQTDPSSAPV CTQSTVVIAC PCCIMH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.4707K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935053.10.0uncharacterized protein LOC107461104 isoform X2
TrEMBLA0A445BTR80.0A0A445BTR8_ARAHY; Uncharacterized protein
STRINGGLYMA06G10170.11e-149(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.25e-53MYB_related family protein