PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.47FQ1

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 141aa MW: 15793.8 Da PI: 8.3225

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.47FQ1	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.9	1.9e-14	51	128	1	82
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 kfY++YAk +GFs+r+++++++ +ei+++ +Cs+egk +++ + +++t+++ +C a++ ++ k g w +++l Aradu.47FQ1 51 KFYRNYAKVAGFSTRVRSTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCPARIYIHTLKdVGAWIIHTLA 128 6**************98887..8889*********998877...8999**********998879***9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.9E-11	51	128	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence Send to blast
MDHSTSDCQL NPGEVDYEFE SNEVPEPLSV VDDELVPKVG MTFTTLEDAR KFYRNYAKVA 60 GFSTRVRSTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN PTAGLNCPAR IYIHTLKDVG 120 AWIIHTLAVQ AKQRCSNSTG N

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.47FQ1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-124	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997160.1	6e-82	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020997362.1	1e-81	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444ZP79	3e-90	A0A444ZP79_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	4e-08	FAR1-related sequence 7